Stem-loop pte-mir-35f

Accession

MI0038067

Description

Parasteatoda tepidariorum pte-mir-35f precursor miRNA

Sequence

UGGAAUUUUUCGCUGCGGUGGUUuauauuugaaaaUCACCGGGUGAAAAAUUUCUUU
.(((((((((((((.(((((((((........))))))))))))))))))))))...

Structure

--U             G         aua 
   GGAAUUUUUCGCU CGGUGGUUu   u
   ||||||||||||| |||||||||    
   CUUUAAAAAGUGG GCCACUaaa   u
UUU             -         agu 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6405166-6405222 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-35f

Mature pte-miR-35f-5p

• Accession: MIMAT0046180
• Description: Parasteatoda tepidariorum pte-miR-35f-5p mature miRNA
• Sequence: 1 - UGGAAUUUUUCGCUGCGGUGGUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35f-3p

• Accession: MIMAT0046181
• Description: Parasteatoda tepidariorum pte-miR-35f-3p mature miRNA
• Sequence: 36 - UCACCGGGUGAAAAAUUUCUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144