Stem-loop pte-mir-35j-2

Accession

MI0038065

Description

Parasteatoda tepidariorum pte-mir-35j-2 precursor miRNA

Sequence

UCGAGUCUUUCGCUUCGGUAAUUuauaaugaauaaUCACCGGGUGAAAGAUUCGCUU
.(((((((((((((.((((.(((..........))).)))))))))))))))))...

Structure

--U             U    A   uaua 
   CGAGUCUUUCGCU CGGU AUU    a
   ||||||||||||| |||| |||     
   GCUUAGAAAGUGG GCCA Uaa    u
UUC             -    C   uaag 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6359442-6359498 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from pte-mir-35j-2

Mature pte-miR-35j-5p

• Accession: MIMAT0046176
• Description: Parasteatoda tepidariorum pte-miR-35j-5p mature miRNA
• Sequence: 1 - UCGAGUCUUUCGCUUCGGUAAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35j-3p

• Accession: MIMAT0046177
• Description: Parasteatoda tepidariorum pte-miR-35j-3p mature miRNA
• Sequence: 36 - UCACCGGGUGAAAGAUUCGCUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144