Stem-loop pte-mir-35d

Accession

MI0038063

Description

Parasteatoda tepidariorum pte-mir-35d precursor miRNA

Sequence

UGAAAUUUUUCGCUGCGGUAGUUuauauuugaaaaUCACCGGGUGAAAAAUUUGCCU
..((((((((((((.((((.((((........)))).))))))))))))))))....

Structure

--UG            G    A    aua 
    AAAUUUUUCGCU CGGU GUUu   u
    |||||||||||| |||| ||||    
    UUUAAAAAGUGG GCCA Uaaa   u
UCCG            -    C    agu 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6402310-6402366 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-35d

Mature pte-miR-35d-5p

• Accession: MIMAT0046174
• Description: Parasteatoda tepidariorum pte-miR-35d-5p mature miRNA
• Sequence: 1 - UGAAAUUUUUCGCUGCGGUAGUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35d-3p

• Accession: MIMAT0046175
• Description: Parasteatoda tepidariorum pte-miR-35d-3p mature miRNA
• Sequence: 36 - UCACCGGGUGAAAAAUUUGCCU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144