Stem-loop pte-mir-35k

Accession

MI0038062

Description

Parasteatoda tepidariorum pte-mir-35k precursor miRNA

Sequence

UUGAAUCCUUCACACGGUAAUUuacaucugauaaUCACCGGGUGAUCGAUUUGCUU
..(((((..((((.((((.(((..........))).)))).))))..)))))....

Structure

--UU     CU    A    A   uaca 
    GAAUC  UCAC CGGU AUU    u
    |||||  |||| |||| |||     
    UUUAG  AGUG GCCA Uaa    c
UUCG     CU    G    C   uagu 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6359629-6359684 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from pte-mir-35k

Mature pte-miR-35k-5p

• Accession: MIMAT0046172
• Description: Parasteatoda tepidariorum pte-miR-35k-5p mature miRNA
• Sequence: 1 - UUGAAUCCUUCACACGGUAAUU - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35k-3p

• Accession: MIMAT0046173
• Description: Parasteatoda tepidariorum pte-miR-35k-3p mature miRNA
• Sequence: 35 - UCACCGGGUGAUCGAUUUGCUU - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144