Stem-loop pte-mir-35n-1

Accession

MI0038060

Description

Parasteatoda tepidariorum pte-mir-35n-1 precursor miRNA

Sequence

UCGAAUCUUUCUCUACGGUAAUUucuuauuuaaaaaUCACCGGGAGAAUAGAUUUGCUU
.(((((((((((((.((((.((((.........)))).)))))))))).)))))))...

Structure

--U       -      A    A    cuu 
   CGAAUCU UUCUCU CGGU AUUu   a
   ||||||| |||||| |||| ||||   u
   GUUUAGA AAGAGG GCCA Uaaa   u
UUC       U      -    C    aau 

Annotation confidence Not enough data

Genome context

Scf5bK3_3068: 16552-16610 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from pte-mir-35n-1

Mature pte-miR-35n-5p

• Accession: MIMAT0046170
• Description: Parasteatoda tepidariorum pte-miR-35n-5p mature miRNA
• Sequence: 1 - UCGAAUCUUUCUCUACGGUAAUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35n-3p

• Accession: MIMAT0046171
• Description: Parasteatoda tepidariorum pte-miR-35n-3p mature miRNA
• Sequence: 37 - UCACCGGGAGAAUAGAUUUGCUU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144