Stem-loop pte-mir-35o-1

Accession

MI0038057

Description

Parasteatoda tepidariorum pte-mir-35o-1 precursor miRNA

Sequence

AGUUGUUAAUAGCUCGGUGAUggagaauuacccuUCACCGGGAGGUUAAUAUGCUUU
((((((((((..((((((((.((........)).))))))))..))))))).)))..

Structure

--   -       AG        U  aga 
  AGU UGUUAAU  CUCGGUGA gg   a
  ||| |||||||  |||||||| ||    
  UCG AUAAUUG  GGGCCACU cc   u
UU   U       GA        u  cau 

Annotation confidence Not enough data

Genome context

Scf5bK3_73: 4659837-4659893 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from pte-mir-35o-1

Mature pte-miR-35o-5p

• Accession: MIMAT0046164
• Description: Parasteatoda tepidariorum pte-miR-35o-5p mature miRNA
• Sequence: 1 - AGUUGUUAAUAGCUCGGUGAU - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35o-3p

• Accession: MIMAT0046165
• Description: Parasteatoda tepidariorum pte-miR-35o-3p mature miRNA
• Sequence: 35 - UCACCGGGAGGUUAAUAUGCUUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144