Stem-loop pte-mir-35c

Accession

MI0038056

Description

Parasteatoda tepidariorum pte-mir-35c precursor miRNA

Sequence

CAAAAUUUUUCGCUGCGGUGGUUuagauuugaaaaUCACCGGGCGAAAAGUUUGCUU
..((((((((((((.(((((((((........)))))))))))))))))))))....

Structure

--CA            G         aga 
    AAAUUUUUCGCU CGGUGGUUu   u
    |||||||||||| |||||||||    
    UUUGAAAAGCGG GCCACUaaa   u
UUCG            -         agu 

Annotation confidence Not enough data

Genome context

Scf5bK3_786: 6403218-6403274 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from pte-mir-35c

Mature pte-miR-35c-5p

• Accession: MIMAT0046162
• Description: Parasteatoda tepidariorum pte-miR-35c-5p mature miRNA
• Sequence: 1 - CAAAAUUUUUCGCUGCGGUGGUU - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-35c-3p

• Accession: MIMAT0046163
• Description: Parasteatoda tepidariorum pte-miR-35c-3p mature miRNA
• Sequence: 36 - UCACCGGGCGAAAAGUUUGCUU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144