Stem-loop pte-mir-305

Accession

MI0038052

Description

Parasteatoda tepidariorum pte-mir-305 precursor miRNA

Literature search

1 open access papers mention pte-mir-305
(1 sentences)

Sequence

UUUGUACUUCAUUAGGUGCUCugguguaaacgagauuccAGGCAUCUAAGGGAGUGCAAAUG
((((((((((.((((((((.((((.((.......)).)))))))))))).))))))))))..

Structure

--          A        U    u  aa 
  UUUGUACUUC UUAGGUGC Cugg gu  a
  |||||||||| |||||||| |||| ||  c
  AAACGUGAGG AAUCUACG GAcc ua  g
GU          G        -    u  ga 

Annotation confidence Not enough data

Genome context

Scf5bK3_1778: 111273-111334 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-305

Mature pte-miR-305-5p

• Accession: MIMAT0046154
• Description: Parasteatoda tepidariorum pte-miR-305-5p mature miRNA
• Sequence: 1 - UUUGUACUUCAUUAGGUGCUC - 21
• Evidence: experimental ; Illumina [1]

Mature pte-miR-305-3p

• Accession: MIMAT0046155
• Description: Parasteatoda tepidariorum pte-miR-305-3p mature miRNA
• Sequence: 40 - AGGCAUCUAAGGGAGUGCAAAUG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144