Stem-loop pte-mir-11938

Accession

MI0038051

Description

Parasteatoda tepidariorum pte-mir-11938 precursor miRNA

Sequence

UGUCUAAGAAGUUUAAGUGUCCagugcauaaugaaccagGCAUCUUUACUUCUCAGACAUA
(((((.((((((..(((((((..((.........))..)))).))).)))))).)))))..

Structure

--     A      UU   -    Ca  gca 
  UGUCU AGAAGU  AAG UGUC  gu   u
  ||||| ||||||  ||| ||||  ||   a
  ACAGA UCUUCA  UUC ACGg  ca   a
AU     C      -U   U    ac  agu 

Annotation confidence Not enough data

Genome context

Scf5bK3_479: 10328885-10328945 [+]

Mature pte-miR-11938-5p

• Accession: MIMAT0046152
• Description: Parasteatoda tepidariorum pte-miR-11938-5p mature miRNA
• Sequence: 1 - UGUCUAAGAAGUUUAAGUGUCC - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-11938-3p

• Accession: MIMAT0046153
• Description: Parasteatoda tepidariorum pte-miR-11938-3p mature miRNA
• Sequence: 40 - GCAUCUUUACUUCUCAGACAUA - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144