Stem-loop pte-mir-2g-1

Accession

MI0038049

Description

Parasteatoda tepidariorum pte-mir-2g-1 precursor miRNA

Literature search

2 open access papers mention pte-mir-2g-1
(17 sentences)

Sequence

AAACUGAUGCUGUGAUGUGuaaauucaauuaucaUAUCACAGCCAGCUUUGAUGAG
...(((..((((((((((((((......))).))))))))))))))..........

Structure

-------AAA   AU           -   au 
          CUG  GCUGUGAUGUG uaa  u
          |||  ||||||||||| |||   
          GAC  CGACACUAUac auu  c
GAGUAGUUUC   --           u   aa 

Annotation confidence Not enough data

Genome context

Scf5bK3_5995: 359336-359391 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from pte-mir-2g-1

Mature pte-miR-2g-5p

• Accession: MIMAT0046149
• Description: Parasteatoda tepidariorum pte-miR-2g-5p mature miRNA
• Sequence: 1 - AAACUGAUGCUGUGAUGUG - 19
• Evidence: experimental ; Illumina [1]

Mature pte-miR-2g-3p

• Accession: MIMAT0046150
• Description: Parasteatoda tepidariorum pte-miR-2g-3p mature miRNA
• Sequence: 35 - UAUCACAGCCAGCUUUGAUGAG - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144