Stem-loop pte-mir-2e

Accession

MI0038047

Description

Parasteatoda tepidariorum pte-mir-2e precursor miRNA

Literature search

2 open access papers mention pte-mir-2e
(17 sentences)

Sequence

ACGUCGAAGUGGCUGUGAAAUGuauucacuuuaccaUAUCACAGCUAUCUUUGACGUGU
((((((((((((((((((.(((((.......)).))).))))))))).)))))))))..

Structure

--         -         A   -  uu 
  ACGUCGAAG UGGCUGUGA AUG ua  c
  ||||||||| ||||||||| ||| ||  a
  UGCAGUUUC AUCGACACU Uac au  c
UG         U         A   c  uu 

Annotation confidence Not enough data

Genome context

Scf5bK3_5995: 356661-356719 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from pte-mir-2e

Mature pte-miR-2e-5p

• Accession: MIMAT0046145
• Description: Parasteatoda tepidariorum pte-miR-2e-5p mature miRNA
• Sequence: 1 - ACGUCGAAGUGGCUGUGAAAUG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-2e-3p

• Accession: MIMAT0046146
• Description: Parasteatoda tepidariorum pte-miR-2e-3p mature miRNA
• Sequence: 37 - UAUCACAGCUAUCUUUGACGUGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144