Stem-loop pte-mir-2c

Accession

MI0038045

Description

Parasteatoda tepidariorum pte-mir-2c precursor miRNA

Literature search

2 open access papers mention pte-mir-2c
(17 sentences)

Sequence

UCAUCAAAUUGGCAGUGAUCUGuuacauuugaaucaUAUCACAGCCAUCUUGAUGAUC
(((((((..((((.(((((.((............)).))))).))))..)))))))..

Structure

--       AU    A     C  uuaca 
  UCAUCAA  UGGC GUGAU UG     u
  |||||||  |||| ||||| ||      
  AGUAGUU  ACCG CACUA ac     u
CU       CU    A     U  uaagu 

Annotation confidence Not enough data

Genome context

Scf5bK3_5995: 356792-356849 [+]

Clustered miRNAs

6 other miRNAs are < 10 kb from pte-mir-2c

Mature pte-miR-2c-5p

• Accession: MIMAT0046141
• Description: Parasteatoda tepidariorum pte-miR-2c-5p mature miRNA
• Sequence: 1 - UCAUCAAAUUGGCAGUGAUCUG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-2c-3p

• Accession: MIMAT0046142
• Description: Parasteatoda tepidariorum pte-miR-2c-3p mature miRNA
• Sequence: 37 - UAUCACAGCCAUCUUGAUGAUC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144