Stem-loop pte-mir-2a

Accession

MI0038042

Description

Parasteatoda tepidariorum pte-mir-2a precursor miRNA

Literature search

2 open access papers mention pte-mir-2a
(17 sentences)

Sequence

CUCUCAAGGUGGCUGUUAUAUGuguguugaaauaauauuucaUAUCACAGCUGCUUUGAUGAGUG
((((((((((((((((.(((((.((((((...))))))..))))).))))))))))))).)))..

Structure

--   -             U     -u      a 
  CUC UCAAGGUGGCUGU AUAUG  guguug  
  ||| ||||||||||||| |||||  |||||| a
  GAG AGUUUCGUCGACA UAUac  uauaau  
GU   U             C     uu      a 

Annotation confidence Not enough data

Genome context

Scf5bK3_595: 726238-726302 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from pte-mir-2a

Mature pte-miR-2a-5p

• Accession: MIMAT0046136
• Description: Parasteatoda tepidariorum pte-miR-2a-5p mature miRNA
• Sequence: 1 - CUCUCAAGGUGGCUGUUAUAUG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-2a-3p

• Accession: MIMAT0046137
• Description: Parasteatoda tepidariorum pte-miR-2a-3p mature miRNA
• Sequence: 43 - UAUCACAGCUGCUUUGAUGAGUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144