Stem-loop pte-mir-29a

Accession

MI0038040

Description

Parasteatoda tepidariorum pte-mir-29a precursor miRNA

Sequence

ACCGAGUUCGGAUGGUGGAUAGAugcuauuagaaagucUAGCACCAUUUGAAUUCAGUUC
...((((((((((((((..(((((...........))))).)))))))))))))).....

Structure

--ACC              GA     gcua 
     GAGUUCGGAUGGUG  UAGAu    u
     ||||||||||||||  |||||    u
     CUUAAGUUUACCAC  AUcug    a
CUUGA              -G     aaag 

Annotation confidence Not enough data

Genome context

Scf5bK3_306: 7670891-7670950 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-mir-29a

Mature pte-miR-29a-5p

• Accession: MIMAT0046132
• Description: Parasteatoda tepidariorum pte-miR-29a-5p mature miRNA
• Sequence: 1 - ACCGAGUUCGGAUGGUGGAUAGA - 23
• Evidence: experimental ; Illumina [1]

Mature pte-miR-29a-3p

• Accession: MIMAT0046133
• Description: Parasteatoda tepidariorum pte-miR-29a-3p mature miRNA
• Sequence: 39 - UAGCACCAUUUGAAUUCAGUUC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144