miRBase entry: pte-mir-35b

Stem-loop pte-mir-35b


Accession
MI0038038
Description
Parasteatoda tepidariorum pte-mir-35b precursor miRNA


Sequence

GCAAGUUUUUCACCUUGGUAAUUuauauuuguuaaUCACCGGGUGGAAAAUUUGAAC
.((((((((((((((.(((.(((..........))).)))))))))))))))))...

Structure
--G              U   A   uaua 
   CAAGUUUUUCACCU GGU AUU    u
   |||||||||||||| ||| |||     
   GUUUAAAAGGUGGG CCA Uaa    u
CAA              -   C   uugu 


Annotation confidence Not enough data
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Genome context
Scf5bK3_15357: 253-309 [+]

Database links

Mature pte-miR-35b-5p

Accession MIMAT0046128
Description Parasteatoda tepidariorum pte-miR-35b-5p mature miRNA
Sequence 1 - GCAAGUUUUUCACCUUGGUAAUU - 23
Evidence experimental
Illumina [1]

Mature pte-miR-35b-3p

Accession MIMAT0046129
Description Parasteatoda tepidariorum pte-miR-35b-3p mature miRNA
Sequence 36 - UCACCGGGUGGAAAAUUUGAAC - 57
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144