Stem-loop pte-mir-278b

Accession

MI0038035

Description

Parasteatoda tepidariorum pte-mir-278b precursor miRNA

Literature search

1 open access papers mention pte-mir-278b
(1 sentences)

Sequence

CCGGAAGAGAAUUCCCACCUUAACCguucuauagcaaaaggUCGGUGGGAUUUUCGUCCGUCU
.((((.((((((.((((((...(((..............))).)))))))))))).))))...

Structure

--C    A      U      UUA   guucua 
   CGGA GAGAAU CCCACC   ACC      u
   |||| |||||| ||||||   |||       
   GCCU CUUUUA GGGUGG   Ugg      a
UCU    G      -      --C   aaaacg 

Annotation confidence Not enough data

Genome context

Scf5bK3_214: 1515459-1515521 [-]

Mature pte-miR-278b-5p

• Accession: MIMAT0046122
• Description: Parasteatoda tepidariorum pte-miR-278b-5p mature miRNA
• Sequence: 1 - CCGGAAGAGAAUUCCCACCUUAACC - 25
• Evidence: experimental ; Illumina [1]

Mature pte-miR-278b-3p

• Accession: MIMAT0046123
• Description: Parasteatoda tepidariorum pte-miR-278b-3p mature miRNA
• Sequence: 42 - UCGGUGGGAUUUUCGUCCGUCU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144