miRBase entry: pte-mir-277b

Stem-loop pte-mir-277b


Accession
MI0038033
Description
Parasteatoda tepidariorum pte-mir-277b precursor miRNA


Sequence

CGUUCCAGAGGUGCAUUAUACauagacauuugUAAAUGCACCCUCUAGAACCAU
.((((.(((((((((((.((((........)))))))))).))))).))))...

Structure
--C    C     -      A    uag 
   GUUC AGAGG UGCAUU UACa   a
   |||| ||||| |||||| ||||    
   CAAG UCUCC ACGUAA AUgu   c
UAC    A     C      -    uua 


Annotation confidence Not enough data
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Genome context
Scf5bK3_269: 1826846-1826899 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pte-mir-277b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature pte-miR-277b-5p

Accession MIMAT0046118
Description Parasteatoda tepidariorum pte-miR-277b-5p mature miRNA
Sequence 1 - CGUUCCAGAGGUGCAUUAUAC - 21
Evidence experimental
Illumina [1]

Mature pte-miR-277b-3p

Accession MIMAT0046119
Description Parasteatoda tepidariorum pte-miR-277b-3p mature miRNA
Sequence 33 - UAAAUGCACCCUCUAGAACCAU - 54
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144