Stem-loop pte-mir-193b

Accession

MI0038025

Description

Parasteatoda tepidariorum pte-mir-193b precursor miRNA

Literature search

1 open access papers mention pte-mir-193b
(2 sentences)

Sequence

UAUGGGUCUUGACAGAACAGACgauuuuauaaucUACUGGCCUGCUAAGUCCCACA
..((((.((((.(((..(((..((((....))))..)))..))).)))).))))..

Structure

UA    U    A   AA   AC    u 
  UGGG CUUG CAG  CAG  gauu u
  |||| |||| |||  |||  ||||  
  ACCC GAAU GUC  GUC  cuaa a
AC    U    C   CG   AU    u 

Annotation confidence Not enough data

Genome context

Scf5bK3_1700: 847059-847114 [-]

Mature pte-miR-193b-5p

• Accession: MIMAT0046103
• Description: Parasteatoda tepidariorum pte-miR-193b-5p mature miRNA
• Sequence: 1 - UAUGGGUCUUGACAGAACAGAC - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-193b-3p

• Accession: MIMAT0046104
• Description: Parasteatoda tepidariorum pte-miR-193b-3p mature miRNA
• Sequence: 35 - UACUGGCCUGCUAAGUCCCACA - 56
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144