miRBase entry: pte-mir-125b

Stem-loop pte-mir-125b


Accession
MI0038020
Description
Parasteatoda tepidariorum pte-mir-125b precursor miRNA

Literature search
1 open access papers mention pte-mir-125b
(4 sentences)

Sequence

UCCCUGAGACCCUAACUUGUGauggauucauugcuucgcaCAAGUUAGUGUCUCGGGCC
..((((((((.((((((((((.((((........)))))))))))))).))))))))..

Structure
UC        C          a    uuc 
  CCUGAGAC CUAACUUGUG ugga   a
  |||||||| |||||||||| ||||    
  GGGCUCUG GAUUGAACac gcuu   u
CC        U          -    cgu 


Annotation confidence Not enough data
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Genome context
Scf5bK3_97: 8375232-8375290 [+]

Database links

Mature pte-miR-125b-5p

Accession MIMAT0046094
Description Parasteatoda tepidariorum pte-miR-125b-5p mature miRNA
Sequence 1 - UCCCUGAGACCCUAACUUGUG - 21
Evidence experimental
Illumina [1]

Mature pte-miR-125b-3p

Accession MIMAT0046095
Description Parasteatoda tepidariorum pte-miR-125b-3p mature miRNA
Sequence 41 - CAAGUUAGUGUCUCGGGCC - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 27324919
    Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
    Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
    Genome Biol Evol (2016) 8:2133-2144