Stem-loop pte-mir-100a

Accession

MI0038017

Description

Parasteatoda tepidariorum pte-mir-100a precursor miRNA

Literature search

1 open access papers mention pte-mir-100a
(5 sentences)

Sequence

UACCCGUAGAUCCGAACUUGUGuucacuugaacuccaCAAGUUUGAUUUUACGGGUUGA
.(((((((((..(((((((((((((....))))...)))))))))..)))))))))...

Structure

--U         UC         ---    a 
   ACCCGUAGA  CGAACUUGU   Guuc c
   |||||||||  |||||||||   ||||  
   UGGGCAUUU  GUUUGAACa   caag u
AGU         UA         ccu    u 

Annotation confidence Low

Genome context

Scf5bK3_446: 4913478-4913536 [+]

Mature pte-miR-100a-5p

• Accession: MIMAT0046088
• Description: Parasteatoda tepidariorum pte-miR-100a-5p mature miRNA
• Sequence: 1 - UACCCGUAGAUCCGAACUUGUG - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-100a-3p

• Accession: MIMAT0046089
• Description: Parasteatoda tepidariorum pte-miR-100a-3p mature miRNA
• Sequence: 38 - CAAGUUUGAUUUUACGGGUUGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144