Stem-loop pte-mir-10

Accession

MI0038016

Description

Parasteatoda tepidariorum pte-mir-10 precursor miRNA

Literature search

2 open access papers mention pte-mir-10
(5 sentences)

Sequence

UACCCUGUAGAUCCGAAUUUGUggcaaaaagcauaaCAAAUUCGGUUCUAGAGAGGUUC
.(((((.((((.((((((((((.((.....))...)))))))))).)))).)).)))..

Structure

-U   -  G    U          --g  a 
  ACC CU UAGA CCGAAUUUGU   gc a
  ||| || |||| ||||||||||   || a
  UGG GA AUCU GGCUUAAACa   cg a
CU   A  G    U          aua  a 

Annotation confidence Not enough data

Genome context

Scf5bK3_497: 2682407-2682465 [+]

Mature pte-miR-10-5p

• Accession: MIMAT0046086
• Description: Parasteatoda tepidariorum pte-miR-10-5p mature miRNA
• Sequence: 1 - UACCCUGUAGAUCCGAAUUUGU - 22
• Evidence: experimental ; Illumina [1]

Mature pte-miR-10-3p

• Accession: MIMAT0046087
• Description: Parasteatoda tepidariorum pte-miR-10-3p mature miRNA
• Sequence: 37 - CAAAUUCGGUUCUAGAGAGGUUC - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144