Stem-loop pte-iab-4-1

Accession

MI0038010

Description

Parasteatoda tepidariorum pte-iab-4-1 precursor miRNA

Literature search

1 open access papers mention pte-iab-4-1
(1 sentences)

Sequence

UCGUAUACUGAAUGUAUCCUGAuaauaauugacucucCGGUAUACCUUCAGUAUACGUAAC
.(((((((((((.((((((.((.............)).)).)))).)))))))))))....

Structure

---U           U    -  U  uaaua 
    CGUAUACUGAA GUAU CC GA     a
    ||||||||||| |||| || ||     u
    GCAUAUGACUU CAUA GG cu     u
CAAU           C    U  C  cucag 

Annotation confidence Not enough data

Genome context

Scf5bK3_497: 896331-896391 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pte-iab-4-1

Mature pte-iab-4-5p

• Accession: MIMAT0046077
• Description: Parasteatoda tepidariorum pte-iab-4-5p mature miRNA
• Sequence: 1 - UCGUAUACUGAAUGUAUCCUGA - 22
• Evidence: experimental ; Illumina [1]

Mature pte-iab-4-3p

• Accession: MIMAT0046078
• Description: Parasteatoda tepidariorum pte-iab-4-3p mature miRNA
• Sequence: 38 - CGGUAUACCUUCAGUAUACGUAAC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144