Stem-loop pte-bantam

Accession

MI0038009

Description

Parasteatoda tepidariorum pte-bantam precursor miRNA

Sequence

CUGGUUUUCCCAAUGAUCAUCCAgaggaauauaugaaaucUGAGAUCAUUGUGAAAGCUGAUU
..(((((((.((((((((...((((.............)))).)))))))).)))))))....

Structure

--CU       C        AUC    ggaau 
    GGUUUUC CAAUGAUC   CAga     a
    ||||||| ||||||||   ||||     u
    UCGAAAG GUUACUAG   GUcu     a
UUAG       U        --A    aaagu 

Annotation confidence Not enough data

Genome context

Scf5bK3_3958: 148742-148804 [+]

Mature pte-bantam-5p

• Accession: MIMAT0046075
• Description: Parasteatoda tepidariorum pte-bantam-5p mature miRNA
• Sequence: 1 - CUGGUUUUCCCAAUGAUCAUCCA - 23
• Evidence: experimental ; Illumina [1]

Mature pte-bantam-3p

• Accession: MIMAT0046076
• Description: Parasteatoda tepidariorum pte-bantam-3p mature miRNA
• Sequence: 41 - UGAGAUCAUUGUGAAAGCUGAUU - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27324919
   Pervasive microRNA Duplication in Chelicerates: Insights from the Embryonic microRNA Repertoire of the Spider Parasteatoda tepidariorum
   Leite DJ, Ninova M, Hilbrant M, Arif S, Griffiths-Jones S, Ronshaugen M, McGregor AP
   Genome Biol Evol (2016) 8:2133-2144