Stem-loop gmo-mir-11934

Accession

MI0038005

Description

Gadus morhua gmo-mir-11934 precursor miRNA

Sequence

CCCACAGCGGCUGCACUUGGAUGCuguguaacaaaagguGACCGAAUGCUGCGUUGUGAUAG
..(((((((.(.(((.((((..(((...........)))..)))).))).))))))))....

Structure

--CC       G U   C    AU   gugu 
    CACAGCG C GCA UUGG  GCu    a
    ||||||| | ||| ||||  |||    a
    GUGUUGC G CGU AGCC  ugg    c
GAUA       - U   A    AG   aaaa 

Annotation confidence Not enough data

Genome context

HE569582.1: 191747-191808 [+]

Mature gmo-miR-11934-5p

• Accession: MIMAT0046067
• Description: Gadus morhua gmo-miR-11934-5p mature miRNA
• Sequence: 1 - CCCACAGCGGCUGCACUUGGAUGC - 24
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-11934-3p

• Accession: MIMAT0046068
• Description: Gadus morhua gmo-miR-11934-3p mature miRNA
• Sequence: 40 - GACCGAAUGCUGCGUUGUGAUAG - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324