Stem-loop gmo-mir-11930

Accession

MI0038000

Description

Gadus morhua gmo-mir-11930 precursor miRNA

Sequence

AAAAUCCACACAUCAGCACGGAuuauccauaagcacguucgUAUGCUGAUCCGCGGAUUUCCC
.((((((.(..((((((((((((.............))))))..))))))..).))))))...

Structure

--A      A AC      --      uaucc 
   AAAUCC C  AUCAGC  ACGGAu     a
   |||||| |  ||||||  ||||||     u
   UUUAGG G  UAGUCG  Ugcuug     a
CCC      C CC      UA      cacga 

Annotation confidence Not enough data

Genome context

HE567695.1: 897992-898054 [-]

Mature gmo-miR-11930-5p

• Accession: MIMAT0046058
• Description: Gadus morhua gmo-miR-11930-5p mature miRNA
• Sequence: 1 - AAAAUCCACACAUCAGCACGGA - 22
• Evidence: experimental ; Illumina [1]

Mature gmo-miR-11930-3p

• Accession: MIMAT0046059
• Description: Gadus morhua gmo-miR-11930-3p mature miRNA
• Sequence: 42 - UAUGCUGAUCCGCGGAUUUCCC - 63
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 27128807
   Discovery of miRNAs and Their Corresponding miRNA Genes in Atlantic Cod (Gadus morhua): Use of Stable miRNAs as Reference Genes Reveals Subgroups of miRNAs That Are Highly Expressed in Particular Organs
   Andreassen R, Rangnes F, Sivertsen M, Chiang M, Tran M, Worren MM
   PLoS One (2016) 11:e0153324