Stem-loop mes-MIR11892

Accession

MI0037924

Description

Manihot esculenta mes-MIR11892 precursor miRNA

Literature search

1 open access papers mention mes-MIR11892
(8 sentences)

Sequence

caaugugcuuUUGUCAUCUCAACCUUGUGUCagauuuuugucugguucucgcaagggaaaacaaaaucugacucaagguugagguagcaaaagauuagcauugu
((((((.(((((((.((((((((((((.((((((((((.((....(((((....))))).)))))))))))).)))))))))))).)))))))....)))))).

Structure

-      ---g       C            U          u  cugg     g 
 caaugu    cuuUUGU AUCUCAACCUUG GUCagauuuu gu    uucuc c
 ||||||    ||||||| |||||||||||| |||||||||| ||    |||||  
 guuacg    gaaaacg uggaguuggaac cagucuaaaa ca    aaggg a
u      auua       a            u          -  ---a     a 

Annotation confidence Not enough data

Genome context

scaffold09889: 5902-6005 [-]

Mature mes-miR11892

• Accession: MIMAT0045988
• Description: Manihot esculenta mes-miR11892 mature miRNA
• Sequence: 11 - UUGUCAUCUCAACCUUGUGUC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26822616
   High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs
   Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN
   BMC Genomics (2016) 17:85