Accession
MI0037910
Description
Manihot esculenta
mes-MIR477k precursor miRNA
Literature search
3 open access papers mention mes-MIR477k
(11 sentences)
(11 sentences)
Sequence
uuuccuuucaagguauugguugcucACUCUCCCUCAAGAGCUUCUCauaugugcccuagcaugcaugcauccaagcuauaaaagaagaagaaaaaacaacgcuuucgaucagcugaguuucgaugcgagaagcucuugcugggagaguggacaagcagugacuugcuagccauca
....((..((((..((((.(((.((((((((((.((((((((((((....((((....))))....(((((.(((((.........((((............)))).........))))).)))))))))))))))))..)))))))))).))).))))..))))..))......
....((..((((..((((.(((.((((((((((.((((((((((((....((((....))))....(((((.(((((.........((((............)))).........))))).)))))))))))))))))..)))))))))).))).))))..))))..))......
Structure
--uuuc uu gu g c -U auaugugcccuagcaugcau c auaaaagaa aaaaa
cu caag auug uug ucACUCUCCC CAAGAGCUUCUC gcauc aagcu gaag a
|| |||| |||| ||| |||||||||| |||||||||||| ||||| ||||| ||||
ga guuc ugac aac ggugagaggg guucucgaagag cguag uuuga cuuu c
acuacc uc ag g a uc -------------------- c gucgacuag cgcaa
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
scaffold06716: 23178-23352 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from mes-MIR477k
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature mes-miR477k
| Accession | MIMAT0045974 |
| Description | Manihot esculenta mes-miR477k mature miRNA |
| Sequence | 26 - ACUCUCCCUCAAGAGCUUCUC - 46 |
| Evidence |
experimental
Illumina [1] |
References
|
