Stem-loop pca-mir-6039

Accession

MI0037632

Description

Polistes canadensis pca-mir-6039 precursor miRNA

Sequence

uuucucuaGAUCGAACGCAUGAAUCUACGUguggaguuguggugacgUAGACACACGCGUUGGACCCUagagcaugg
...((((((.((.(((((.((..(((((((..............)))))))..)).))))).))..)))))).....

Structure

--uuu      -A  G     A  AA       guggag 
     cucuaG  UC AACGC UG  UCUACGU      u
     ||||||  || ||||| ||  |||||||       
     gagaUC  AG UUGCG AC  AGAUgca      u
gguac      CC  G     C  AC       guggug 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-6039-5p

• Accession: MIMAT0045953
• Description: Polistes canadensis pca-miR-6039-5p mature miRNA
• Sequence: 9 - GAUCGAACGCAUGAAUCUACGU - 30
• Evidence: experimental ; Illumina [1]

Mature pca-miR-6039-3p

• Accession: MIMAT0045954
• Description: Polistes canadensis pca-miR-6039-3p mature miRNA
• Sequence: 48 - UAGACACACGCGUUGGACCCU - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975