Stem-loop pca-mir-6001

Accession

MI0037630

Description

Polistes canadensis pca-mir-6001 precursor miRNA

Sequence

uaaaccacacaguuucauaguaacagagGUGGGUAACGACUGACGGGAAcaucccguauagugauuaaugUUCUCUUUGGUUGUUACCACUAGaauaccauacacgguga
...........................(((((.((((((((((.((((((((...............)))))))).)))))))))))))))....((((......)))).

Structure

uaaaccacacaguuucauaguaacaga     G          C        cccgua 
                           gGUGG UAACGACUGA GGGAAcau      u
                           ||||| |||||||||| ||||||||      a
                           UCACC AUUGUUGGUU CUCUUgua      g
--------aguggcacauaccauaaGA     -          U        auuagu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-6001-5p

• Accession: MIMAT0045949
• Description: Polistes canadensis pca-miR-6001-5p mature miRNA
• Sequence: 29 - GUGGGUAACGACUGACGGGAA - 49
• Evidence: experimental ; Illumina [1]

Mature pca-miR-6001-3p

• Accession: MIMAT0045950
• Description: Polistes canadensis pca-miR-6001-3p mature miRNA
• Sequence: 71 - UUCUCUUUGGUUGUUACCACUAG - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975