Stem-loop pca-mir-2796

Accession

MI0037621

Description

Polistes canadensis pca-mir-2796 precursor miRNA

Sequence

aagcugaagaaaauaguuguaaaacgacaaggauAGGGGUUUCUAUCGGCCUccagcaguuacgauaguuGUAGGCCGGCGGAAACUACUUGCucuugucgcuaauaau
.(((((.......)))))......((((((((.(((((((((((.(((((((.((((..........)))).))))))).))))))).)))).))))))))........

Structure

aagcugaagaaaauaguuguaaaa        a    -       A       c    aguu 
                        cgacaagg uAGG GGUUUCU UCGGCCU cagc    a
                        |||||||| |||| ||||||| ||||||| ||||     
                        gcuguucu GUUC UCAAAGG GGCCGGA Guug    c
----------------uaauaauc        C    A       C       U    auag 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-2796-5p

• Accession: MIMAT0045935
• Description: Polistes canadensis pca-miR-2796-5p mature miRNA
• Sequence: 35 - AGGGGUUUCUAUCGGCCU - 52
• Evidence: experimental ; Illumina [1]

Mature pca-miR-2796-3p

• Accession: MIMAT0045936
• Description: Polistes canadensis pca-miR-2796-3p mature miRNA
• Sequence: 71 - GUAGGCCGGCGGAAACUACUUGC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975