Stem-loop pca-mir-281

Accession

MI0037600

Description

Polistes canadensis pca-mir-281 precursor miRNA

Sequence

aaaacaaggcgcgaacuaugAAGAGAGCUAUCCAUCGACAGUaugguaaaaaaagacacUGUCAUGGAGUUGCUCUCUUUGuggacgccguccuauacaacgacgacuaacu
..........(((..(((((((((((((..(((((.((((((...((........)))))))))))))...))))))))))))).)))((((.........)))).......

Structure

--------------aaaacaaggc   aa             -UA     C      aug  aaa 
                        gcg  cuaugAAGAGAGC   UCCAU GACAGU   gu   a
                        |||  |||||||||||||   ||||| ||||||   ||    
                        cgc  gguGUUUCUCUCG   AGGUA CUGUca   ca   a
ucaaucagcagcaacauauccugc   -a             UUG     -      ---  gaa 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-281-5p

• Accession: MIMAT0045893
• Description: Polistes canadensis pca-miR-281-5p mature miRNA
• Sequence: 21 - AAGAGAGCUAUCCAUCGACAGU - 42
• Evidence: experimental ; Illumina [1]

Mature pca-miR-281-3p

• Accession: MIMAT0045894
• Description: Polistes canadensis pca-miR-281-3p mature miRNA
• Sequence: 60 - UGUCAUGGAGUUGCUCUCUUUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975