Stem-loop pca-mir-279b

Accession

MI0037598

Description

Polistes canadensis pca-mir-279b precursor miRNA

Sequence

gaaaaaaaaucuauuauccggcggccuuggAUGGGUUUGAAUUCAGUCCACGuuuuuuuauuuuauucgUGACUAGAUCCACACUCAUCCaaggauaccgggguuuaua
................(((((...((((((((((((.((.(((.((((.(((...............))))))).))).)).))))))))))))...))))).......

Structure

gaaaaaaaaucuauua     cgg            U  A   C    C   uuuuuu 
                uccgg   ccuuggAUGGGU UG AUU AGUC ACG      u
                |||||   |||||||||||| || ||| |||| |||      a
                gggcc   ggaaCCUACUCA AC UAG UCAG Ugc      u
---------auauuug     aua            C  C   A    -   uuauuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-279b-5p

• Accession: MIMAT0045889
• Description: Polistes canadensis pca-miR-279b-5p mature miRNA
• Sequence: 31 - AUGGGUUUGAAUUCAGUCCACG - 52
• Evidence: experimental ; Illumina [1]

Mature pca-miR-279b-3p

• Accession: MIMAT0045890
• Description: Polistes canadensis pca-miR-279b-3p mature miRNA
• Sequence: 70 - UGACUAGAUCCACACUCAUCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975