Stem-loop pca-mir-278

Accession

MI0037597

Description

Polistes canadensis pca-mir-278 precursor miRNA

Sequence

gaagcgaugcauCCGGAUGACGUCUGCACCGGCCgugaucguaaacuuuuuaucuggUCGGUGGGACUUUCGUCCGUUUgcaaugcucacga
((.(((.((((..(((((((.((((.(((((((((.(((.(........).))))))))))))))))..)))))))..)))).)))))....

Structure

----  a   a    uC       -C    G         u   c uaa 
    ga gcg ugca  CGGAUGA  GUCU CACCGGCCg gau g   a
    || ||| ||||  |||||||  |||| ||||||||| ||| |    
    cu cgu acgU  GCCUGCU  CAGG GUGGCUggu cua u   c
agca  -   a    UU       UU    -         -   u uuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-278-5p

• Accession: MIMAT0045887
• Description: Polistes canadensis pca-miR-278-5p mature miRNA
• Sequence: 13 - CCGGAUGACGUCUGCACCGGCC - 34
• Evidence: experimental ; Illumina [1]

Mature pca-miR-278-3p

• Accession: MIMAT0045888
• Description: Polistes canadensis pca-miR-278-3p mature miRNA
• Sequence: 58 - UCGGUGGGACUUUCGUCCGUUU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975