Stem-loop pca-mir-275

Accession

MI0037594

Description

Polistes canadensis pca-mir-275 precursor miRNA

Sequence

uauuauuauuauaagucauucgcaacaCGUGCUACUCUGGUACUUCAGGCugugccaguuuucuaaucagUCAGGUACCUGAAGUAGCGCGcgcugcggagggacacg
..............(((.((((((.(.((((((((((.(((((((..(((((....((....))...)))))))))))).).))))))))).).))))))..)))...

Structure

uauuauuauuauaa   -a      a a         - U       CA     ugcc  u 
              guc  uucgca c CGUGCUACU C GGUACUU  GGCug    ag u
              |||  |||||| | ||||||||| | |||||||  |||||    ||  
              cag  aggcgu g GCGCGAUGA G CCAUGGA  CUgac    uc u
-----------gca   gg      c c         A U       --     -uaa  u 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-275-5p

• Accession: MIMAT0045881
• Description: Polistes canadensis pca-miR-275-5p mature miRNA
• Sequence: 28 - CGUGCUACUCUGGUACUUCAGGC - 50
• Evidence: experimental ; Illumina [1]

Mature pca-miR-275-3p

• Accession: MIMAT0045882
• Description: Polistes canadensis pca-miR-275-3p mature miRNA
• Sequence: 71 - UCAGGUACCUGAAGUAGCGCG - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975