Stem-loop pca-mir-219

Accession

MI0037591

Description

Polistes canadensis pca-mir-219 precursor miRNA

Sequence

gaaugucccaggcuaUGAUUGUCCAAACGCAAUUCUUGucugaacgauaugaaaucaAGAAUUGUGUGGGGACAUCAGCgcucg
..........(((..((((.((((..((((((((((((.................))))))))))))..))))))))..)))..

Structure

gaauguccca   ua    U    AA            ucugaac 
          ggc  UGAU GUCC  ACGCAAUUCUUG       g
          |||  |||| ||||  ||||||||||||       a
          ucg  ACUA CAGG  UGUGUUAAGAac       u
--------gc   CG    -    GG            uaaagua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-219-5p

• Accession: MIMAT0045875
• Description: Polistes canadensis pca-miR-219-5p mature miRNA
• Sequence: 16 - UGAUUGUCCAAACGCAAUUCUUG - 38
• Evidence: experimental ; Illumina [1]

Mature pca-miR-219-3p

• Accession: MIMAT0045876
• Description: Polistes canadensis pca-miR-219-3p mature miRNA
• Sequence: 58 - AGAAUUGUGUGGGGACAUCAGC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975