Stem-loop pca-mir-190

Accession

MI0037589

Description

Polistes canadensis pca-mir-190 precursor miRNA

Sequence

aaugaaugccaaguuucgugAGAUAUGUUUGAUAUUCUUGGUUGuuuuaugaauaaucgACCAGGAAUCAAACAUAUUAUUAcgacguuugguucgaacaacauaugucauauu
...((..((((((..((((((((((((((((((..(((((((((.((.......)).))))))))))))))))))))).))))))..))))))))...................

Structure

----------------aau  au      uu      -            AU         u  ua 
                   ga  gccaag  ucgugA GAUAUGUUUGAU  UCUUGGUUG uu  u
                   ||  ||||||  |||||| ||||||||||||  ||||||||| ||  g
                   cu  ugguuu  agcAUU UUAUACAAACUA  AGGACCAgc aa  a
uuauacuguauacaacaag  --      gc      A            --         u  ua 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-190-5p

• Accession: MIMAT0045871
• Description: Polistes canadensis pca-miR-190-5p mature miRNA
• Sequence: 21 - AGAUAUGUUUGAUAUUCUUGGUUG - 44
• Evidence: experimental ; Illumina [1]

Mature pca-miR-190-3p

• Accession: MIMAT0045872
• Description: Polistes canadensis pca-miR-190-3p mature miRNA
• Sequence: 60 - ACCAGGAAUCAAACAUAUUAUUA - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975