Stem-loop pca-mir-33

Accession

MI0037580

Description

Polistes canadensis pca-mir-33 precursor miRNA

Sequence

uguuucuuuugaaguaugcuuaccuguuacgaguGUGCAUUGUAGUUGCAUUGcgugaaauacaacuaugCAAUACUUCUACAGUGCAACUCcuguggcaggccaaaguacc
..((((....))))..(((((.((((((((((((.((((((((((..(.((((((((.........)))))))).)..))))))))))))))..))))))))...)))))..

Structure

uguuucuuuugaagua     --a        --    G          UU C        aaa 
                ugcuu   ccuguuac  gagu UGCAUUGUAG  G AUUGcgug   u
                |||||   ||||||||  |||| ||||||||||  | ||||||||   a
                augaa   ggacggug  CUCA ACGUGACAUC  C UAACguau   c
--------------cc     acc        uc    -          UU A        caa 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-33-5p

• Accession: MIMAT0045853
• Description: Polistes canadensis pca-miR-33-5p mature miRNA
• Sequence: 35 - GUGCAUUGUAGUUGCAUUG - 53
• Evidence: experimental ; Illumina [1]

Mature pca-miR-33-3p

• Accession: MIMAT0045854
• Description: Polistes canadensis pca-miR-33-3p mature miRNA
• Sequence: 71 - CAAUACUUCUACAGUGCAACUC - 92
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975