Stem-loop pca-mir-13a

Accession

MI0037575

Description

Polistes canadensis pca-mir-13a precursor miRNA

Sequence

aaaagguuuuuucuuuucgaaaauguuugcgguccgauAAAUCAAAUUGGCUGUGGAAUguugcgagucaUAUCACAGCCAUUUUGAUGACCUuggcccgcaaaaccga
....(((((((((.....)))))...((((((.((((...((((((.(((((((((.(((........))).))))))))).))))))....)))).))))))))))..

Structure

aaaa    uuuucuuuucgaaaaugu      u    -uAA      U         A   uug 
    gguu                  uugcgg ccga    AUCAAA UGGCUGUGG AUg   c
    ||||                  |||||| ||||    |||||| ||||||||| |||    
    ccaa                  aacgcc gguU    UAGUUU ACCGACACU Uac   g
--ag    ------------------      c    CCAG      U         A   uga 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-13a-5p

• Accession: MIMAT0045844
• Description: Polistes canadensis pca-miR-13a-5p mature miRNA
• Sequence: 39 - AAAUCAAAUUGGCUGUGGAAU - 59
• Evidence: experimental ; Illumina [1]

Mature pca-miR-13a-3p

• Accession: MIMAT0045845
• Description: Polistes canadensis pca-miR-13a-3p mature miRNA
• Sequence: 71 - UAUCACAGCCAUUUUGAUGACCU - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975