Stem-loop pca-mir-1

Accession

MI0037569

Description

Polistes canadensis pca-mir-1 precursor miRNA

Sequence

ggcgucuguuCCGUGCUUCCUUACUUCCCAUAgugaaugugacguaUGGAAUGUAAAGAAGUAUGGAGccgcgcucagg
(((((..((((((((((((.((((...(((((((.......)).)))))...)))).)))))))))))).)))))....

Structure

----     cu            C    UUC     -  ga 
    ggcgu  guuCCGUGCUUC UUAC   CCAUA gu  a
    |||||  |||||||||||| ||||   ||||| ||  u
    ucgcg  cGAGGUAUGAAG AAUG   GGUau ca  g
ggac     -c            A    UAA     g  gu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pca-miR-1-5p

• Accession: MIMAT0045832
• Description: Polistes canadensis pca-miR-1-5p mature miRNA
• Sequence: 11 - CCGUGCUUCCUUACUUCCCAUA - 32
• Evidence: experimental ; Illumina [1]

Mature pca-miR-1-3p

• Accession: MIMAT0045833
• Description: Polistes canadensis pca-miR-1-3p mature miRNA
• Sequence: 47 - UGGAAUGUAAAGAAGUAUGGAG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26483466
   Molecular signatures of plastic phenotypes in two eusocial insect species with simple societies
   "Patalano S, Vlasova A, Wyatt C, Ewels P, Camara F, Ferreira PG, Asher CL, Jurkowski TP, Segonds-Pichon A, Bachman M, Gonzalez-Navarrete I, Minoche AE, Krueger F, Lowy E, Marcet-Houben M, Rodriguez-Ales JL, Nascimento FS, Balasubramanian S, Gabaldon T, Tar"
   "Proc Natl Acad Sci U S A (2015) 112:13970-13975