miRBase entry: tca-mir-11624b-2

Stem-loop tca-mir-11624b-2


Accession
MI0037448
Description
Tribolium castaneum tca-mir-11624b-2 precursor miRNA


Sequence

826 reads, 53.0 reads per million, 24 experiments
auugggacuuuaccauuuucaugcaauuuauaucaucaUGAUGUGCUAAAGUGUCGGUUUU
(((((.((((((.(((..(((((.............))))).))).)))))).)))))...

Structure
---     g      c   uu     caauu 
   auugg acuuua cau  ucaug     u
   ||||| |||||| |||  |||||     a
   UGGCU UGAAAU GUG  AGUac     u
UUU     G      C   -U     uacua 


Annotation confidence Not enough data
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Genome context
ref|NC_007421.3|: 9957245-9957305 [-]
Clustered miRNAs
7 other miRNAs are < 10 kb from tca-mir-11624b-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature tca-miR-11624b-3p

Accession MIMAT0045529
Description Tribolium castaneum tca-miR-11624b-3p mature miRNA
Sequence 39 - UGAUGUGCUAAAGUGUCGGUUUU - 61
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26518483
    MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
    "Ninova M, Ronshaugen M, Griffiths-Jones S"
    "Genome Res (2016) 26:85-96