Stem-loop tca-mir-11630

Accession

MI0037398

Description

Tribolium castaneum tca-mir-11630 precursor miRNA

Sequence

cagcuacuggucuauuagUCAGAUAUGGGUGGAAUGGUGAUGGuaaucaugaacacccAUCAAAUUCAGUUAUGUCUGGCuggauaccaguc
.....((((((...((((((((((((((.((((....((((((.............))))))..)))).))))))))))))))..)))))).

Structure

cagcu      cua              G    AUGG      uaauc 
     acuggu   uuagUCAGAUAUGG UGGA    UGAUGG     a
     ||||||   |||||||||||||| ||||    ||||||     u
     ugacca   gguCGGUCUGUAUU ACUU    ACUAcc     g
----c      -ua              G    --AA      cacaa 

Annotation confidence Low

Genome context

Unmapped18: 218708-218799 [-]

Mature tca-miR-11630-5p

• Accession: MIMAT0045552
• Description: Tribolium castaneum tca-miR-11630-5p mature miRNA
• Sequence: 19 - UCAGAUAUGGGUGGAAUGGUGAUGG - 43
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11630-3p

• Accession: MIMAT0045553
• Description: Tribolium castaneum tca-miR-11630-3p mature miRNA
• Sequence: 59 - AUCAAAUUCAGUUAUGUCUGGC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96