Stem-loop tca-mir-11622

Accession

MI0037379

Description

Tribolium castaneum tca-mir-11622 precursor miRNA

Sequence

acuaaaucaguugaugUAAAGGAAUUGCAGGAUUGAAAugucugcagcguuUUAGUCUUGUAAAUUCCUUUGGGuuuacugauaaaaa
.....((((((.(((.(((((((((((((((((((((((((.....))))))))))))))).)))))))))).))).)))))).....

Structure

acuaa      u   g          -               c 
     aucagu gau UAAAGGAAUU GCAGGAUUGAAAugu u
     |||||| ||| |||||||||| ||||||||||||||| g
     uaguca uuG GUUUCCUUAA UGUUCUGAUUuugcg c
aaaaa      u   G          A               a 

Annotation confidence Not enough data

Genome context

ChLG3: 1732366-1732453 [-]

Mature tca-miR-11622-5p

• Accession: MIMAT0045517
• Description: Tribolium castaneum tca-miR-11622-5p mature miRNA
• Sequence: 17 - UAAAGGAAUUGCAGGAUUGAAA - 38
• Evidence: experimental ; Illumina [1]

Mature tca-miR-11622-3p

• Accession: MIMAT0045518
• Description: Tribolium castaneum tca-miR-11622-3p mature miRNA
• Sequence: 52 - UUAGUCUUGUAAAUUCCUUUGGG - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26518483
   MicroRNA evolution, expression, and function during short germband development in Tribolium castaneum
   "Ninova M, Ronshaugen M, Griffiths-Jones S"
   "Genome Res (2016) 26:85-96