Stem-loop pla-MIR11599

Accession

MI0037331

Description

Paeonia lactiflora pla-MIR11599 precursor miRNA

Literature search

1 open access papers mention pla-MIR11599
(1 sentences)

Sequence

cacgguugagUUCAACCGUGGUAGAUGUUAAaaauaucuaccacgguuaaauucaaccgugguaguuguuaaaaauauuuaccacgguugaccucaaccgugguuguugcuaaaggggaaauagaagggggaaaauagucggggaaauaaaaggggggaaauaacccgcuaaauuuugauaaaaauaucuaccacgguuggacccaaccgug
((((((((.((((((((((((((((((((...((((.(((((((((((......))))))))))).))))..........((((((((((....))))))))))..((.((....)).)).................(((((((.......((.(((.......))).))...)))))))...)))))))))))))))))))).))))))))

Structure

        a                    --------------------------------------------------------------------------------------------------------------AAa    u           aa 
cacgguug gUUCAACCGUGGUAGAUGUU                                                                                                                 aaua cuaccacgguu  a
|||||||| ||||||||||||||||||||                                                                                                                 |||| |||||||||||   
gugccaac cagguuggcaccaucuauaa                                                                                                                 uugu gauggugccaa  u
        c                    aaauaguuuuaaaucgcccaauaaaggggggaaaauaaaggggcugauaaaagggggaagauaaaggggaaaucguuguuggugccaacuccaguuggcaccauuuauaaaaa    u           cu 

Annotation confidence Not enough data

Genome context

Unknown

Mature pla-miR11599

• Accession: MIMAT0045452
• Description: Paeonia lactiflora pla-miR11599 mature miRNA
• Sequence: 11 - UUCAACCGUGGUAGAUGUUAA - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26393656
   Identification of miRNAs Responsive to Botrytis cinerea in Herbaceous Peony (Paeonia lactiflora Pall.) by High-Throughput Sequencing
   Zhao D, Gong S, Hao Z, Tao J
   Genes (Basel) (2015) 6:918-934