miRBase entry: bdo-mir-306

Stem-loop bdo-mir-306

Accession

MI0037318

Description

Bactrocera dorsalis bdo-mir-306 precursor miRNA

Literature search

1 open access papers mention bdo-mir-306
(1 sentences)

Sequence

CCAGGUACUUAGUGACUCUCAaguaggcauugccauuuaacgcugaggguuacuuugugccuaagc
..((((((..(((((((((((.((.(((...))).....))..)))))))))))..))))))....

Structure

--CC      UU           -a  ----a   a 
    AGGUAC  AGUGACUCUCA  gu     ggc  
    ||||||  |||||||||||  ||     ||| u
    uccgug  ucauugggagu  ca     ccg  
cgaa      uu           cg  auuua   u

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

scaffold00027: 1321794-1321859 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from bdo-mir-306

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature bdo-miR-306

Accession	MIMAT0045439
Description	Bactrocera dorsalis bdo-miR-306 mature miRNA
Sequence	1 - CCAGGUACUUAGUGACUCUCA - 21
Evidence	experimental Torrent [1]

References

PubMed ID: 26438165
MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
Calla B, Geib SM
BMC Genomics (2015) 16:740