Stem-loop bdo-mir-13b

Accession

MI0037286

Description

Bactrocera dorsalis bdo-mir-13b precursor miRNA

Literature search

1 open access papers mention bdo-mir-13b
(3 sentences)

Sequence

ucguuaaaauguuuguguuuaugucgccauuugcauacucaUAUCACAGCCAUUUUGACGAGUU
(((((((((((.(((((..((((..((.....)).....)))).))))).)))))))))))...

Structure

---           u     uu    ---uc  c 
   ucguuaaaaug uugug  uaug     gc a
   ||||||||||| |||||  ||||     || u
   AGCAGUUUUAC GACAC  AUac     cg u
UUG           C     -U    ucaua  u 

Annotation confidence Not enough data

Genome context

scaffold00020: 1021893-1021956 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bdo-mir-13b

Mature bdo-miR-13b

• Accession: MIMAT0045409
• Description: Bactrocera dorsalis bdo-miR-13b mature miRNA
• Sequence: 42 - UAUCACAGCCAUUUUGACGAGUU - 64
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740