Stem-loop bdo-mir-2a-1

Accession

MI0037280

Description

Bactrocera dorsalis bdo-mir-2a-1 precursor miRNA

Literature search

1 open access papers mention bdo-mir-2a-1
(4 sentences)

Sequence

ucucacaaagugguugugaaaugcucuauuugaaacugcaUAUCACAGCCAGCUUUGAUGAGCU
.((((((((((((((((((.((((.............)))).))))))))).))))).))))..

Structure

-u    -     -         a    ucuau 
  cuca caaag ugguuguga augc     u
  |||| ||||| ||||||||| ||||     u
  GAGU GUUUC ACCGACACU Uacg     g
UC    A     G         A    ucaaa 

Annotation confidence Not enough data

Genome context

scaffold00002: 2204625-2204688 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from bdo-mir-2a-1

Mature bdo-miR-2a

• Accession: MIMAT0045403
• Description: Bactrocera dorsalis bdo-miR-2a mature miRNA
• Sequence: 41 - UAUCACAGCCAGCUUUGAUGAGCU - 64
• Evidence: experimental ; Torrent [1]

References

1. PubMed ID: 26438165
   MicroRNAs in the oriental fruit fly, Bactrocera dorsalis: extending Drosophilid miRNA conservation to the Tephritidae
   Calla B, Geib SM
   BMC Genomics (2015) 16:740