Stem-loop cas-MIR2111b

Accession

MI0037243

Description

Camelina sativa cas-MIR2111b precursor miRNA

Sequence

gguaaucugcauccugagguuuaaaacuucauaagcauagauuugcgaaugcaaaguuuuuaAUCCUCGGGAUACGGAUUACC
(((((((((.(((((((((...((((((((((..(((......)))..)))..)))))))....))))))))).)))))))))

Structure

         c         -uuu       --   aa   ua 
gguaaucug auccugagg    aaaacuu  cau  gca  g
||||||||| |||||||||    |||||||  |||  |||   
CCAUUAGGC UAGGGCUCC    uuuugaa  gua  cgu  a
         A         UAau       ac   ag   uu 

Annotation confidence Not enough data

Genome context

chr13: 433532-433614 [+]

Mature cas-miR2111b

• Accession: MIMAT0045366
• Description: Camelina sativa cas-miR2111b mature miRNA
• Sequence: 63 - AUCCUCGGGAUACGGAUUACC - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542