Stem-loop cas-MIR845

Accession

MI0037238

Description

Camelina sativa cas-MIR845 precursor miRNA

Sequence

cgucaauugcugucagagccacacgcuaugcucuucacuugcguagaagaauuugugCGGCUCUGAUACCAAUUGAUG
(((((((((.((((((((((.((((((((((.........)))))).......)))).)))))))))).)))))))))

Structure

         c          a    -------      ucu 
cgucaauug ugucagagcc cacg       cuaugc   u
||||||||| |||||||||| ||||       ||||||   c
GUAGUUAAC AUAGUCUCGG gugu       gaugcg   a
         C          C    uuaagaa      uuc 

Annotation confidence Not enough data

Genome context

chr11: 9967886-9967963 [+]

Mature cas-miR845

• Accession: MIMAT0045361
• Description: Camelina sativa cas-miR845 mature miRNA
• Sequence: 58 - CGGCUCUGAUACCAAUUGAUG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542