Stem-loop cas-MIR395b

Accession

MI0037221

Description

Camelina sativa cas-MIR395b precursor miRNA

Literature search

1 open access papers mention cas-MIR395b
(1 sentences)

Sequence

ccuuaaguucccuuaaacgcuucacuguucauacuuuguuuuuaagaucuaucgauggauaaauuaaucugaugaacaCUGAAGUGUUUGGGGGGACUCuagg
(((..(((((((((((((((((((.(((((((...(((.(((....(((....)))....))).)))....))))))).)))))))))))))))))))..)))

Structure

   ua                   c       -acu   u   uaag   u 
ccu  aguucccuuaaacgcuuca uguucau    uug uuu    auc a
|||  ||||||||||||||||||| |||||||    ||| |||    |||  
gga  UCAGGGGGGUUUGUGAAGU acaagua    aau aaa    uag u
   uC                   C       gucu   u   uagg   c 

Annotation confidence Not enough data

Genome context

chr5: 31459366-31459468 [+]

Mature cas-miR395b

• Accession: MIMAT0045341
• Description: Camelina sativa cas-miR395b mature miRNA
• Sequence: 79 - CUGAAGUGUUUGGGGGGACUC - 99
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542