Stem-loop cas-MIR169b

Accession

MI0037198

Description

Camelina sativa cas-MIR169b precursor miRNA

Literature search

1 open access papers mention cas-MIR169b
(1 sentences)

Sequence

augCAGCCAAGGAUGACUUGCCGGaacauuguuaaucaugcauauauggugauaaacauauuucuggcaaguuguccuucggcuacau
(((.((((((((((((((((((((((...((((.(((((.........))))).))))...)))))))))))))))))).)))).)))

Structure

   C    -                  cau    a     gca 
aug AGCC AAGGAUGACUUGCCGGaa   uguu aucau   u
||| |||| ||||||||||||||||||   |||| |||||   a
uac ucgg uuccuguugaacggucuu   acaa uagug   u
   a    c                  uau    a     gua 

Annotation confidence Not enough data

Genome context

chr8: 9461148-9461235 [+]

Mature cas-miR169b

• Accession: MIMAT0045311
• Description: Camelina sativa cas-miR169b mature miRNA
• Sequence: 4 - CAGCCAAGGAUGACUUGCCGG - 24
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 25826400
   Identification of microRNAs and transcript targets in Camelina sativa by deep sequencing and computational methods
   Poudel S, Aryal N, Lu C
   PLoS One (2015) 10:e0121542